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RNASeq")) biocLite("RTCGA.miRNASeq")
61 if(! require("maftools")) biocLite("maftools")
62 if(! require("genefilter")) biocLite("genefilter")
63
64
65 # Then from : https://github.com/ShixiangWang
66 # You don't need run the codes below, I will explain to you face to face.
67
68 source("http://bioconductor.org/biocLite.R")
69 packs = c("devtools", "reshape2", "ggplot2", "pheatmap", "ggfortify", "stringr", "survival",
70 "survminer", "lars", "glmnet", "timeROC", "ggpubr", "randomForest", "ROCR", "genefilter",
71 "Hmisc", "caret", "airway","DESeq2","edgeR","limma", "CLL", "org.Hs.eg.db", "maftools")
72 if(! require(pacman)) install.packages("pacman", dependencies = TRUE)
73 pacman::p_load(packs, dependencies=TRUE, character.only = TRUE)
74 # check
75 pacman::p_loaded(packs, character.only = TRUE)
76 all(pacman::p_loaded(packs, character.only = TRUE))
注：本文转自“生信技能树”
https://mp.weixin.qq.com/s?__biz=MzAxMDkxODM1Ng==&mid=2247487157&idx=1&sn=0540a2788eba7b5a96a6d4f907d92718&chksm=9b484e0eac3fc71864f0e1d5959ac5f768bd3289312c2d0776cbe663a888edd056b092175d5c&mpshare=1&scene=23&srcid=0809lYoGGKt6uOM4j8rCH40P#rd
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